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Table 2 Analysis of 5-component curve resolution results from Alpha-696 data. Cell-cycle related genes from Alpha-full that have a strong correlation (r>0.8) with extracted profiles are listed, along with the associated phase. See text for more details.

From: Multivariate curve resolution of time course microarray data

 

Curve 1

Curve 2

Curve 3

Curve 4

Curve 5

 

AGA2 M/G1 (3)

GLK1 M/G1 (6)

HHF2 S (1)

CLB2 M (2)

EGT2 M/G1 (2)

 

AGA1 M/G1 (5)

CLB6 G1 (8)

HTA1 S (2)

CYK2 M (6)

BUD9 G1 (5)

 

SST2 M/G1 (9)

MFA1 G1 (10)

HTB1 S (3)

CDC5 M (7)

SIC1 M/G1 (10)

 

STE2 M (10)

 

HHF1 S (4)

IQG1 M (8)

FAA3 M/G1 (12)

 

KAR4 M/G1 (13)

 

HHT1 S (5)

MYO1 M (13)

PCL9 M/G1 (13)

 

FUS1 M/G1 (22)

 

HHT2 S (6)

SWI5 M (14)

ASH1 M/G1 (19)

 

MFA2 M (24)

 

HTA2 S (7)

CLB1 M (15)

 
   

HTB2 S (9)

ALK1 M (16)

 
   

HHO1 S (11)

PHO3 M (17)

 
   

SPC98 G1 (13)

PHO5 M (18)

 
   

GAS1 G1 (14)

BUD4 M (19)

 
   

PSA1 G1 (17)

CDC20 M (20)

 
   

HTA3 S (18)

PMP1 M (28)

 
   

STU2 S (25)

PMA2 M (30)

 
   

WSC2 S (26)

MOB1 M (31)

 
   

GOG5 S (28)

PMA1 M (32)

 
   

SUR4 G1 (29)

PHO11 M (33)

 
   

RFA3 G1 (30)

CHS2 M (36)

 
   

PDS1 G1 (32)

CDC47 M (37)

 
   

PMT1 G1 (33)

ACE2 M (38)

 

Ntot (Nmatch):

27 (7)

12 (3)

1398 (101)

80 (24)

20 (6)

Classification:

M/G1

G1

S

M

M/G1

Scores: G1

0.000

0.014

0.326

0.000

0.008

S

0.000

0.000

0.743

0.000

0.000

G2

0.000

0.000

0.443

0.025

0.000

M

0.028

0.000

0.080

0.331

0.000

M/G1

0.110

0.020

0.000

0.000

0.106