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Figure 2 | BMC Bioinformatics

Figure 2

From: Optimised amino acid specific weighting factors for unbound protein docking

Figure 2

Enrichment curves for [PDB:1BVN], [PDB:1CGI] and [PDB:1TMQ]. It is shown how many percent of the dataset must be evaluated until which percent value of all near-native (RMSiCα<5Å) are found. (X-axis: Percentage of dataset, Y-axis: Percentage of near-native solutions found). The black line shows the results for the ranking due to the 'classical' geometric correlation and the red line is obtained by the recalculation using the optimised values. (100% equal for 1BVN 23 near-native structures, for 1CGI 58 and for 1TMQ 15).

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