Figure 1
From: BBP: Brucella genome annotation with literature mining and curation
The BBP system architecture for Brucella genome analysis and literature mining and curation. A PubMed literature extraction and parsing program loads all Brucella-related papers from PubMed into the Brucella Limix database and the TextPresso-powered text processing pipeline. An automatic literature update program also extracts Brucella papers published in the recent and previous months. The Limix system provides an efficient way for literature searching and data extraction, edition, and submission by integrating computational text mining programs with manual literature curation and management features. InterBru integrates Brucella genome data from different data sources including our in-house curated data from the Brucella Limix database. The Brucella Genome Browser (BGBrowser) features graphic visualization of Brucella genome data and offers many analysis tools. InterBru and BGBrowser also share the same output page displaying comprehensive Brucella gene and protein information.