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Table 4 Associations of conservation rate coherency scores and SNR with interaction probabilities.

From: A direct comparison of protein interaction confidence assignment schemes

Prob. Scheme

Conservation Coherency (SC*)

SNR

BADER_LOW

0.090

0.734

BADER_HIGH

0.104

0.735

DEANE

0.113

0.537

DENG

0.141

0.950

SHARAN

0.126

0.742

QI

0.080

0.706

EQUAL

--

0.657

  1. * SC: Spearman Correlation. Bold values indicate the scheme which performs the best. Note that conservation scores based on weighted averages were omitted as they were very similar across the different confidence assignment schemes.
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BMC Bioinformatics

ISSN: 1471-2105

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