A fast SCOP fold classification system using content-based E-Predict algorithm

BMC Bioinformatics

Table 3 The number of proteins in general and non-redundant test sets in $Δ_{v_{1}}^{v_{2}, k n o w n}$ which are selected from the known SCOP folds of v₂ with at least 10 protein chains in v₁.

test set	size (#proteins)	test set	size (#proteins)
$Δ_{v 1.55, g e n e r a l}^{v 1.57, k n o w n}$	1832	$Δ_{v 1.55, n o n - r e d u n d a n t}^{v 1.57, k n o w n}$	158
$Δ_{v 1.57, g e n e r a l}^{v 1.59, k n o w n}$	1901	$Δ_{v 1.57, n o n - r e d u n d a n t}^{v 1.59, k n o w n}$	168
$Δ_{v 1.59, g e n e r a l}^{v 1.61, k n o w n}$	2136	$Δ_{v 1.59, n o n - r e d u n d a n t}^{v 1.61, k n o w n}$	166
$Δ_{v 1.61, g e n e r a l}^{v 1.63, k n o w n}$	1947	$Δ_{v 1.61, n o n - r e d u n d a n t}^{v 1.63 k n o w n}$	189
$Δ_{v 1.63, g e n e r a l}^{v 1.65, k n o w n}$	2062	$Δ_{v 1.63, n o n - r e d u n d a n t}^{v 1.65, k n o w n}$	198
$Δ_{v 1.65, g e n e r a l}^{v 1.67, k n o w n}$	4735	$Δ_{v 1.65, n o n - r e d u n d a n t}^{v 1.67, k n o w n}$	302
$Δ_{v 1.67, g e n e r a l}^{v 1.69, k n o w n}$	2298	$Δ_{v 1.67, n o n - r e d u n d a n t}^{v 1.69, k n o w n}$	263

ISSN: 1471-2105