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Table 1 Predicted cell cycle regulators.

From: Modelling the network of cell cycle transcription factors in the yeast Saccharomyces cerevisiae

TF

Phase

Amplitude

Periodicity

Notes

Ste12

318°

0.03

0.26

interacts with Mcm1

Mbp1

280°

0.10

0.30

G1/S, member of the Swi6-Mbp1 (MBF) and Swi4-Swi6-Mbp1 complexes

Swi6

278°

0.07

0.32

G1/S, member of the Swi4-Swi6 (SBF), Swi6-Mbp1 (MBF), and Swi4-Swi6-Mbp1 complexes

Swi4

252°

0.07

0.33

G1/S, member of the Swi4-Swi6 (SBF) and Swi4-Swi6-Mbp1 complexes

Spt2

164°

0.03

0.24

interacts with both histones and SWI-SNF components

Fkh2

160°

0.04

0.26

G2-specific transcription in the mitotic cell cycle, forms complex with Ndd1 and Mcm1

Ndd1

098°

0.08

0.30

late S, forms complex with Fkh2 and Mcm1

Bas1

084°

0.02

0.21

regulation of basal and induced expression of genes of the purine and histidine biosynthesis pathways

Mcm1

044°

0.03

0.27

DNA replication initiation (TAS), member of Fkh2-Ndd1-Mcm1 and Mcm1-Swi5-Ace2 complexes

Yox1

025°

0.06

0.19

binds to Mcm1p and Early Cell-cycle Boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1

Swi5

002°

0.06

0.20

G1 and at the M/G1 boundary, forms complex with Mcm1 and Ace2

Ace2

001°

0.05

0.29

G1, forms complex with Mcm1 and Swi5

  1. Shown are the cell cycle regulators used in the expanded 12-factor model. The phases and amplitudes of the α-coefficients of each factor are calculated from the model's long-term asymptotic dynamics. Transcription factors are ordered by phase and those not in the canonical model are shown in bold.