TY - JOUR AU - Golub, T. R. AU - Slonim, D. K. AU - Tamayo, P. AU - Huard, C. AU - Gaasenbeek, M. AU - Mesirov, J. P. AU - Coller, H. AU - Loh, M. L. AU - Downing, J. R. AU - Caligiuri, M. A. AU - Bloomfield, C. D. AU - Lander, E. S. PY - 1999 DA - 1999// TI - Molecular Classification of Cancer: Class Discovery and Class Prediction by Gene Expression Monitoring JO - Science VL - 286 UR - https://doi.org/10.1126/science.286.5439.531 DO - 10.1126/science.286.5439.531 ID - Golub1999 ER - TY - JOUR AU - Tibshirani, R. AU - Hastie, T. AU - Narasimhan, B. AU - Chu, G. PY - 2002 DA - 2002// TI - Diagnosis of multiple cancer types by shrunken centroids of gene expression JO - Proc Natl Acad Sci VL - 99 UR - https://doi.org/10.1073/pnas.082099299 DO - 10.1073/pnas.082099299 ID - Tibshirani2002 ER - TY - JOUR AU - Alon, U. AU - Barkai, N. AU - Notterman, D. A. AU - Gish, K. AU - Ybarra, S. AU - Mack, D. AU - Levine, A. J. PY - 1999 DA - 1999// TI - Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays JO - Proc Natl Acad Sci VL - 96 UR - https://doi.org/10.1073/pnas.96.12.6745 DO - 10.1073/pnas.96.12.6745 ID - Alon1999 ER - TY - JOUR AU - Ramaswamy, S. AU - Tamayo, P. AU - Rifkin, R. AU - Mukherjee, S. AU - Yeang, C. AU - Angelo, M. AU - Ladd, C. AU - Reich, M. AU - Latulippe, E. AU - Mesirov, J. AU - Poggio, T. AU - Gerald, W. AU - Loda, M. AU - Lander, E. AU - Golub, T. PY - 2001 DA - 2001// TI - Multiclass cancer diagnosis using tumor gene expression signatures JO - Proc Natl Acad Sci VL - 98 UR - https://doi.org/10.1073/pnas.211566398 DO - 10.1073/pnas.211566398 ID - Ramaswamy2001 ER - TY - JOUR AU - Rifkin, R. AU - Mukherjee, S. AU - Tamayo, P. AU - Ramaswamy, S. AU - Yeang, C. AU - Angelo, M. AU - Reich, M. AU - Poggio, T. AU - Lander, E. AU - Golub, T. AU - Mesirov, J. PY - 2003 DA - 2003// TI - An Analytical Method for Multi-class Molecular Cancer Classification JO - SIAM Reviews VL - 45 UR - https://doi.org/10.1137/S0036144502411986 DO - 10.1137/S0036144502411986 ID - Rifkin2003 ER - TY - JOUR AU - Ambroise, C. AU - McLachlan, G. PY - 2002 DA - 2002// TI - Selection bias in gene extraction on the basis of microarray gene-expression data JO - Proc Natl Acad Sci VL - 99 UR - https://doi.org/10.1073/pnas.102102699 DO - 10.1073/pnas.102102699 ID - Ambroise2002 ER - TY - JOUR AU - Simon, R. AU - Radmacher, M. AU - Dobbin, K. AU - McShane, L. PY - 2003 DA - 2003// TI - Pitfalls in the use of DNA Microarray data for diagnostic and prognostic classification JO - J Natl Cancer Inst VL - 95 UR - https://doi.org/10.1093/jnci/95.1.14 DO - 10.1093/jnci/95.1.14 ID - Simon2003 ER - TY - JOUR AU - Zhang, H. AU - Yu, C. AU - Singer, B. AU - Xiong, M. PY - 2001 DA - 2001// TI - Recursive partitioning for tumor classification with gene expression microarray data JO - Proc Natl Acad Sci VL - 98 UR - https://doi.org/10.1073/pnas.111153698 DO - 10.1073/pnas.111153698 ID - Zhang2001 ER - TY - JOUR AU - Guyon, I. AU - Weston, J. AU - Barnhill, S. AU - Vapnik, V. PY - 2002 DA - 2002// TI - Gene selection for cancer classification using Support Vector Machines JO - Machine Learning VL - 46 UR - https://doi.org/10.1023/A:1012487302797 DO - 10.1023/A:1012487302797 ID - Guyon2002 ER - TY - BOOK AU - Vapnik, V. PY - 1998 DA - 1998// TI - Statistical Learning Theory PB - Sons CY - INC ID - Vapnik1998 ER - TY - CHAP AU - Luntz, A. AU - Brailovsky, V. PY - 1969 DA - 1969// TI - On estimation of characters obtained in statistical procedure of recognition BT - Technicheskaya Kibernetica ID - Luntz1969 ER - TY - JOUR AU - Mukherjee, S. AU - Tamayo, P. AU - Rogers, S. AU - Rifkin, R. AU - Engle, A. AU - Campbell, C. AU - Golub, T. AU - Mesirov, J. PY - 2003 DA - 2003// TI - Estimating Dataset Size Requirements for Classifying DNA Microarray Data JO - J Comp Biol VL - 10 UR - https://doi.org/10.1089/106652703321825928 DO - 10.1089/106652703321825928 ID - Mukherjee2003 ER - TY - JOUR AU - Radmacher, M. AU - McShane, L. AU - Simon, R. PY - 2002 DA - 2002// TI - A Paradigm for Class Prediction Using Gene Expression Profiles JO - J Comp Biol VL - 9 UR - https://doi.org/10.1089/106652702760138592 DO - 10.1089/106652702760138592 ID - Radmacher2002 ER - TY - CHAP AU - Slonim, D. AU - Tamayo, P. AU - Mesirov, J. AU - Golub, T. AU - Lander, E. PY - 2000 DA - 2000// TI - Class Prediction and Discovery Using Gene Expression Data BT - Proceedings of the Fourth Annual Conference on Computational Molecular Biology (RECOMB) ID - Slonim2000 ER - TY - CHAP AU - Rifkin, R. AU - Yeo, G. AU - Poggio, T. ED - Suykens ED - Horvath ED - Basu ED - Micchelli ED - Vandewalle PY - 2003 DA - 2003// TI - Regularized Least Squares Classification BT - Advances in Learning Theory: Methods, Model and Applications, NATO Science Series III: Computer and Systems Sciences PB - IOS Press CY - Amsterdam ID - Rifkin2003 ER - TY - JOUR AU - Ancona, N. AU - Maglietta, R. AU - D'Addabbo, A. AU - Liuni, S. AU - Pesole, G. PY - 2005 DA - 2005// TI - Regularized Least Squares Cancer Classifiers from DNA microarray data JO - BMC-Bioinformatics VL - 6 UR - https://doi.org/10.1186/1471-2105-6-S4-S2 DO - 10.1186/1471-2105-6-S4-S2 ID - Ancona2005 ER - TY - BOOK AU - Good, P. PY - 1994 DA - 1994// TI - Permutation tests: a practical guide to resampling methods for testing hypothesis UR - https://doi.org/10.1007/978-1-4757-2346-5 DO - 10.1007/978-1-4757-2346-5 ID - Good1994 ER - TY - JOUR AU - Nichols, T. AU - Holmes, A. PY - 2001 DA - 2001// TI - Nonparametric permutation tests for functional neuroimaging: a primer with examples JO - Hum Brain Mapp VL - 15 UR - https://doi.org/10.1002/hbm.1058 DO - 10.1002/hbm.1058 ID - Nichols2001 ER - TY - BOOK AU - Hastie, T. AU - Tibshirani, R. AU - Friedman, J. PY - 2001 DA - 2001// TI - The elements of statistical learning. Springer series in statistics UR - https://doi.org/10.1007/978-0-387-21606-5 DO - 10.1007/978-0-387-21606-5 ID - Hastie2001 ER - TY - JOUR AU - Kops, G. AU - Weaver, B. AU - Cleveland, D. PY - 2005 DA - 2005// TI - On the road to cancer: aneuploidy and the mitotic checkpoint JO - Nat Rev Cancer VL - 5 UR - https://doi.org/10.1038/nrc1714 DO - 10.1038/nrc1714 ID - Kops2005 ER - TY - JOUR AU - Cahill, D. AU - da Costa, L. AU - Carson-Walter, E. AU - Kinzler, K. AU - Vogelstein, B. AU - Lengauer, C. PY - 1999 DA - 1999// TI - Characterization of MAD2B and other mitotic spindle checkpoint genes JO - Genomics VL - 58 UR - https://doi.org/10.1006/geno.1999.5831 DO - 10.1006/geno.1999.5831 ID - Cahill1999 ER - TY - JOUR AU - Yuan, B. AU - Xu, Y. AU - Woo, J. AU - Wang, Y. AU - Bae, Y. AU - Yoon, D. AU - Wersto, R. AU - Tully, E. AU - Wilsbach, K. AU - Gabrielson, E. PY - 2006 DA - 2006// TI - Increased expression of mitotic checkpoint genes in breast cancer cells with chromosomal instability JO - Clin Cancer Res VL - 12 UR - https://doi.org/10.1158/1078-0432.CCR-05-0903 DO - 10.1158/1078-0432.CCR-05-0903 ID - Yuan2006 ER - TY - JOUR AU - Shapira, M. AU - Ben-Izhak, O. AU - Bishara, B. AU - Futerman, B. AU - Minkov, I. AU - Krausz, M. AU - M, M. P. AU - Hershko, D. PY - 2004 DA - 2004// TI - Alterations in the expression of the cell cycle regulatory protein cyclin kinase subunit 1 in colorectal carcinoma JO - Cancer VL - 100 UR - https://doi.org/10.1002/cncr.20172 DO - 10.1002/cncr.20172 ID - Shapira2004 ER - TY - JOUR AU - Li, M. AU - Lin, Y. AU - Hasegawa, S. AU - Shimokawa, T. AU - Murata, K. AU - Kameyama, M. AU - Ishikawa, O. AU - Katagiri, T. AU - Tsunoda, T. AU - Nakamura, Y. AU - Furukawa, Y. PY - 2004 DA - 2004// TI - Genes associated with liver metastasis of colon cancer, identified by genome-wide cDNA microarray JO - Int J Oncol VL - 24 ID - Li2004 ER - TY - JOUR AU - Tsai, Y. AU - Chang, H. AU - Chuang, L. AU - Hung, W. PY - 2005 DA - 2005// TI - RNA silencing of Cks1 induced G2/M arrest and apoptosis in human lung cancer cells JO - IUBMB Life VL - 57 UR - https://doi.org/10.1080/15216540500215531 DO - 10.1080/15216540500215531 ID - Tsai2005 ER - TY - JOUR AU - Wang, I. AU - Chen, Y. AU - Hughes, D. AU - Petrovic, V. AU - Major, M. AU - Park, H. AU - Tan, Y. AU - Ackerson, T. AU - Costa, R. PY - 2005 DA - 2005// TI - Forkhead box Ml regulates the transcriptional network of genes essential for mitotic progression and genes encoding the SCF (Skp2-Cks1) ubiquitin ligase JO - Mol Cell Biol VL - 25 UR - https://doi.org/10.1128/MCB.25.24.10875-10894.2005 DO - 10.1128/MCB.25.24.10875-10894.2005 ID - Wang2005 ER - TY - JOUR AU - Zhou, H. AU - Kuang, J. AU - Zhong, L. AU - Kuo, W. AU - Gray, J. AU - Sahin, A. AU - Brinkley, B. AU - Sen, S. PY - 1998 DA - 1998// TI - Tumour amplified kinase STK15/BTAK induces centrosome amplification, aneuploidy, and transformation JO - Nat Genet VL - 20 UR - https://doi.org/10.1038/2496 DO - 10.1038/2496 ID - Zhou1998 ER - TY - JOUR AU - Hayes, G. AU - Carrigan, P. AU - Beck, A. AU - Miller, L. PY - 2006 DA - 2006// TI - Targeting the RNA splicing machinery as a novel treatment strategy for pancreatic carcinoma JO - Cancer Res VL - 66 UR - https://doi.org/10.1158/0008-5472.CAN-05-4065 DO - 10.1158/0008-5472.CAN-05-4065 ID - Hayes2006 ER - TY - JOUR AU - Kimura, K. AU - Cuvier, O. AU - Hirano, T. PY - 2001 DA - 2001// TI - Chromosome condensation by a human condensin complex in Xenopus egg extracts JO - J Biol Chem VL - 276 UR - https://doi.org/10.1074/jbc.C000873200 DO - 10.1074/jbc.C000873200 ID - Kimura2001 ER - TY - JOUR AU - Geiman, T. AU - Sankpal, U. AU - Robertson, A. AU - Chen, Y. AU - Mazumdar, M. AU - Heale, J. AU - Schmiesing, J. AU - Kim, W. AU - Yokomori, K. AU - Zhao, Y. AU - Robertson, K. PY - 2004 DA - 2004// TI - Isolation and characterization of a novel DNA methyltransferase complex linking DNMT3B with components of the mitotic chromosome condensation machinery JO - Nucleic Acids Res VL - 32 UR - https://doi.org/10.1093/nar/gkh589 DO - 10.1093/nar/gkh589 ID - Geiman2004 ER - TY - JOUR AU - Adamson, E. AU - Minchiotti, G. AU - Salomon, D. PY - 2002 DA - 2002// TI - Cripto: a tumor growth factor and more JO - J Cell Physiol VL - 190 UR - https://doi.org/10.1002/jcp.10072 DO - 10.1002/jcp.10072 ID - Adamson2002 ER - TY - JOUR AU - Fujita, M. AU - Furukawa, Y. AU - Tsunoda, T. AU - Tanaka, T. AU - Ogawa, M. AU - Nakamura, Y. PY - 2001 DA - 2001// TI - Up-regulation of the ectodermal-neural cortex 1 (ENC1) gene, a downstream target of the beta-catenin/T-cell factor complex, in colorectal carcinomas JO - Cancer Res VL - 61 ID - Fujita2001 ER - TY - JOUR AU - Blache, P. AU - van de Wetering, M. AU - Duluc, I. AU - Domon, C. AU - Berta, P. AU - Freund, J. AU - Clevers, H. AU - Jay, P. PY - 2004 DA - 2004// TI - SOX9 is an intestine crypt transcription factor, is regulated by the Wnt pathway, and represses the CDX2 and MUC2 genes JO - J Cell Biol VL - 166 UR - https://doi.org/10.1083/jcb.200311021 DO - 10.1083/jcb.200311021 ID - Blache2004 ER - TY - JOUR AU - Kau, T. AU - Way, J. AU - Silver, P. PY - 2004 DA - 2004// TI - Nuclear transport and cancer: from mechanism to intervention JO - Nat Rev Cancer VL - 4 UR - https://doi.org/10.1038/nrc1274 DO - 10.1038/nrc1274 ID - Kau2004 ER - TY - JOUR AU - Hagenbuch, B. AU - Meier, P. PY - 2004 DA - 2004// TI - Organic anion transporting polypeptides of the OATP/SLC21 family: phylogenetic classification as OATP/SLCO superfamily, new nomenclature and molecular/functional properties JO - Pflugers Arch VL - 447 UR - https://doi.org/10.1007/s00424-003-1168-y DO - 10.1007/s00424-003-1168-y ID - Hagenbuch2004 ER - TY - JOUR AU - Yamana, K. AU - Bilim, V. AU - Hara, N. AU - Kasahara, T. AU - Itoi, T. AU - Maruyama, R. AU - Nishiyama, T. AU - Takahashi, K. AU - Tomita, Y. PY - 2005 DA - 2005// TI - Prognostic impact of FAS/CD95/APO-1 in urothelial cancers: decreased expression of Fas is associated with disease progression JO - Br J Cancer VL - 93 UR - https://doi.org/10.1038/sj.bjc.6602732 DO - 10.1038/sj.bjc.6602732 ID - Yamana2005 ER - TY - JOUR AU - Chen, Y. AU - Knosel, T. AU - Kristiansen, G. AU - Pietas, A. AU - Garber, M. AU - Matsuhashi, S. AU - Ozaki, I. AU - Petersen, I. PY - 2003 DA - 2003// TI - Loss of PDCD4 expression in human lung cancer correlates with tumour progression and prognosis JO - J Pathol VL - 200 UR - https://doi.org/10.1002/path.1378 DO - 10.1002/path.1378 ID - Chen2003 ER - TY - JOUR AU - Yang, H. AU - Matthews, C. AU - Clair, T. AU - Wang, Q. AU - Baker, A. AU - Li, C. AU - Tan, T. AU - Colburn, N. PY - 2006 DA - 2006// TI - Tumorigenesis suppressor Pdcd4 down-regulates mitogen-activated protein kinase kinase kinase kinase 1 expression to suppress colon carcinoma cell invasion JO - Mol Cell Biol VL - 26 UR - https://doi.org/10.1128/MCB.26.4.1297-1306.2006 DO - 10.1128/MCB.26.4.1297-1306.2006 ID - Yang2006 ER - TY - JOUR AU - Lusis, E. AU - Watson, M. AU - Chicoine, M. AU - Lyman, M. AU - Roerig, P. AU - Reifenberger, G. AU - Gutmann, D. AU - Perry, A. PY - 2005 DA - 2005// TI - Integrative genomic analysis identifies NDRG2 as a candidate tumour suppressor gene frequently inactivated in clinically aggressive meningioma JO - Cancer Res VL - 65 UR - https://doi.org/10.1158/0008-5472.CAN-05-0043 DO - 10.1158/0008-5472.CAN-05-0043 ID - Lusis2005 ER - TY - JOUR AU - Kittiniyom, K. AU - Mastronardi, M. AU - Roemer, M. AU - Wells, W. AU - Greenberg, E. AU - Titus-Ernstoff, L. AU - Newsham, I. PY - 2004 DA - 2004// TI - Allele-specific loss of heterozygosity at the DAL-1/4.1B (EPB41L3) tumour-suppressor gene locus in the absence of mutation JO - Genes Chromosomes Cancer VL - 40 UR - https://doi.org/10.1002/gcc.20034 DO - 10.1002/gcc.20034 ID - Kittiniyom2004 ER - TY - JOUR AU - Seibold, S. AU - Rudroff, C. AU - Weber, M. AU - Galle, J. AU - Wanner, C. AU - Marx, M. PY - 2003 DA - 2003// TI - Identification of a new tumor suppressor gene located at chromosome 8p21.3–22 JO - FASEB J VL - 17 ID - Seibold2003 ER - TY - JOUR AU - Wang, L. AU - Darling, J. AU - Zhang, J. AU - Liu, W. AU - Qian, J. AU - Bostwick, D. AU - Hartmann, L. AU - Jenkins, R. AU - Bardenhauer, W. AU - Schutte, J. AU - Opalka, B. AU - Smith, D. PY - 2000 DA - 2000// TI - Loss of expression of the DRR 1 gene at chromosomal segment 3p21.1 in renal cell carcinoma JO - Genes Chromosomes Cancer VL - 27 UR - https://doi.org/3.0.CO;2-6 DO - 3.0.CO;2-6 ID - Wang2000 ER - TY - JOUR AU - Zhao, W. AU - Hisamuddin, I. AU - Nandan, M. AU - Babbin, B. AU - Lamb, N. AU - Yang, V. PY - 2004 DA - 2004// TI - Identification of Kruppel-like factor 4 as a potential tumor suppressor gene in colorectal cancer JO - Oncogene VL - 23 UR - https://doi.org/10.1038/sj.onc.1207067 DO - 10.1038/sj.onc.1207067 ID - Zhao2004 ER - TY - JOUR AU - Wei, D. AU - Gong, W. AU - Kanai, M. AU - Schlunk, C. AU - Wang, L. AU - Yao, J. AU - Wu, T. AU - Huang, S. AU - Xie, K. PY - 2005 DA - 2005// TI - Drastic down-regulation of Kruppel-like factor 4 expression is critical in human gastric cancer development and progression JO - Cancer Res VL - 65 UR - https://doi.org/10.1158/0008-5472.CAN-04-3619 DO - 10.1158/0008-5472.CAN-04-3619 ID - Wei2005 ER - TY - JOUR AU - Furlanello, C. AU - Serafini, M. AU - Merler, S. AU - Jurman, G. PY - 2003 DA - 2003// TI - Entropy-based gene ranking without selection bias for the predictive classification of microarray data JO - BMC-Bioinformatics VL - 4 UR - https://doi.org/10.1186/1471-2105-4-54 DO - 10.1186/1471-2105-4-54 ID - Furlanello2003 ER -