TY - JOUR AU - Beckstette, Michael AU - Homann, Robert AU - Giegerich, Robert AU - Kurtz, Stefan PY - 2006 DA - 2006/08/24 TI - Fast index based algorithms and software for matching position specific scoring matrices JO - BMC Bioinformatics SP - 389 VL - 7 IS - 1 AB - In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs in nucleotide as well as amino acid sequences. Searching with PSSMs in complete genomes or large sequence databases is a common, but computationally expensive task. SN - 1471-2105 UR - https://doi.org/10.1186/1471-2105-7-389 DO - 10.1186/1471-2105-7-389 ID - Beckstette2006 ER -