Table 3 The genes selected by PART-BFCS and the genes having high correlation with them

1

2

3

4

5

6

7

8

9

10

NM_002415

MIF

9

NIPSNAP1 NM_003634 (0.74)

DDT NM_001355 (0.73)

PORIMIN BG538627 (0.73)

NDUFA7 NM_005001 (0.71)

SNAP29 NM_004782 (0.71)

TSSC3 AF001294 (0.71)

MMP1 NM_002421 (0.71)

LSM1 NM_014462 (0.71)

DGCR14 L77566 (0.71)

MRPL20 NM_017971 (0.69)

AB032261

SCD

8

SCD AA678241 (0.94)

SMAP1 NM_021940 (0.74)

SCD BC005807 (0.69)

NRBF-2 AA883074 (0.67)

INSIG1 NM_005542 (0.65)

FADS1 AL512760 (0.63)

VDAC2 L08666 (0.63)

GLUD1 NM_005271 (0.62)

TFG NM_006070 (0.62)

TFAP2A BF343007 (0.61)

NM_016332

SEPX1

7

SIAH2 U76248 (0.81)

WHSC1 BF111870 (0.73)

KIAA0220 AI424872 (0.73)

BAIAP3 AI799802 (0.71)

TBC1D1 AB029031 (0.70)

FARSLA AD000092 (0.70)

OPRS1 NM_005866 (0.70)

CTBP2 N23018 (0.70)

TCF3 AW062341 (0.69)

KCTD5 NM_018992 (0.68)

AL161999

CYFIP2

5

CRISPLD2 AL136861 (0.91)

NTF3 NM_002527 (0.90)

PRO1331 NM_030778 (0.89)

TNFSF11 AF053712 (0.88)

NTRK3 S76476 (0.87)

SLC24A3 NM_020689 (0.86)

KCNIP1 NM_014592 (0.86)

CP NM_000096 (0.86)

ARTN AF120274 (0.86)

KIAA0523 AB011095 (0.86)

AI218219

HSPCB

5

HSPCB AF275719 (0.89)

HSP105B NM_006644 (0.84)

HSP105B BG403660 (0.82)

FOXG1B NM_005249 (0.81)

HSPD1 BE256479 (0.80)

TERA_ NM_021238 (0.80)

DNAJB1 BG537255 (0.79)

HSPE1 NM_002157 (0.79)

FXR1 AI990766 (0.79)

NXT2 AF201942 (0.78)

AI811298

OSR2

5

OAZ AW149417 (0.80)

FXYD1 NM_005031 (0.78)

FBLN2 NM_001998 (0.78)

PMP22 L03203 (0.73)

KIAA0763 AI652645 (0.73)

TEKNM_000459 (0.73)

KIAA0644 NM_014817 (0.72)

GAS7 BE439987 (0.71)

FLJ10159 NM_018013 (0.70)

WNT10B NM_003394 (0.69)

U67195

TIMP3

5

TIMP3 BF347089 (0.91)

TIMP3 AW338933 (0.90)

IL6ST AW242916 (0.88)

IL6ST NM_002184 (0.88)

IL6ST AB015706 (0.82)

HLA-DRB3 AA807056 (0.80)

TIMP3 NM_000362 (0.78)

IL6ST BE856546 (0.76)

HAS1 NM_001523 (0.74)

C6orf133 AB002347 (0.74)

NM_020122

PCMF

4

NTPBP AB044661 (0.85)

MGC10882 BC004952 (0.80)

C16orf34 AK023154 (0.77)

FKBP4 NM_002014 (0.77)

PFDN2 NM_012394 (0.76)

FKBP4 AA894574 (0.75)

LDLR NM_000527 (0.75)

STIP1 BE886580 (0.74)

AHSA1 NM_012111 (0.74)

FXR1 NM_005087 (0.73)

NM_001998

FBLN2

4

GAS7 NM_005890 (0.86)

GAS7 BE439987 (0.86)

PMP22 L03203 (0.85)

BMP1 NM_006129 (0.79)

OSR2 AI811298 (0.78)

KIAA0644 NM_014817 (0.77)

FXYD1 NM_005031 (0.77)

WNT10B NM_003394 (0.74)

ZDHHC3 NM_016598 (0.73)

AHNAK BG287862 (0.73)

NM_005566

LDHA

4

PLOD2 NM_000935 (0.74)

ALDOA AK026577 (0.72)

ADM NM_001124 (0.70)

PSMA1 NM_002786 (0.69)

ALDOA NM_000034 (0.68)

VDAC1 AL515918 (0.68)

QSCN6 NM_002826 (0.67)

PKM2 NM_002654 (0.67)

PSG3 BC005924 (0.67)

TCP11L1 NM_018393 (0.67)

NM_005756

GPR64

3

ADD3 NM_019903 (0.81)

ADD3 AI818488 (0.79)

SLC4A4 NM_003759 (0.79)

ADD3 AI763123 (0.79)

ADD3 BE545756 (0.78)

CRYAB AF007162 (0.78)

LRRC16 NM_017640 (0.77)

EYA2 U71207 (0.74)

HSPB2 NM_001541 (0.71)

SPRY1 BF508662 (0.71)

AL136663

PLXNA1

2

PCBP2 AW103422 (0.70)

MGC5566 NM_024049 (0.63)

CLIC5 NM_016929 (0.63)

SMAD3 NM_015400 (0.62)

PTPRB NM_002837 (0.62)

SMAD3 BF971416 (0.62)

ICAM2 AA126728 (0.62)

SEMA3G NM_020163 (0.61)

KIAA0417 AB007877 (0.61)

EXT1 NM_000127 (0.60)

AL136663

ABR

2

RNMTL1 NM_018146 (0.72)

MFAP4 R72286 (0.62)

ABR AL136663 (0.61)

KIAA1085 AU160676 (0.61)

P2RX4 NM_002560 (0.61)

CYP2E AF182276 (0.60)

LOC51031 AF061730 (0.60)

ZNF212 NM_012256 (0.59)

GSPT2 NM_018094 (0.59)

IDUA NM_000203 (0.59)

AL527773

RARRES2

2

PANX1 NM_015368 (0.91)

CCT8 NM_006585 (0.89)

GART NM_000819 (0.88)

ASMTL Y15521 (0.87)

ASMTL AA669799 (0.87)

ASMTL BC002508 (0.87)

SERPINB7 NM_003784 (0.85)

SERPINB3 AB046400 (0.84)

SERPINB4 U19557 (0.83)

ATP5O NM_001697 (0.83)

NM_021106

RGS3

2

TDO2 NM_005651 (0.84)

MMP13 NM_002427 (0.81)

COL11A1 NM_001854 (0.80)

MMP9 NM_004994 (0.75)

COL11A1 J04177 (0.74)

CLECSF5 NM_013252 (0.72)

HBA2 T50399 (0.72)

SLC19A1 AF004354 (0.72)

MMP11 AI761713 (0.71)

MMP11 NM_005940 (0.71)

13 additional genes