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Figure 3 | BMC Bioinformatics

Figure 3

From: Application of protein structure alignments to iterated hidden Markov model protocols for structure prediction

Figure 3

Venn diagram describing coverage overlap of the three primary model sets from PS1, when using a strict cutoff of 80 incorrect assignments (theoretical EPQ ~0.05). The numbers shown in parentheses near each model type designation refer to the total number of correct matches made by that model type prior to the cutoff point. Identical matches of the same probes by some or all of the three different methods are provided by the numbers in the set diagram. The completely unique matches by single-master HMMs and SLAHMMs are color coded to match the circle for that model type. "All Models" denotes the assignments made by the combined database of SLAHMMs and single-master HMMs used together in a single search.

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BMC Bioinformatics

ISSN: 1471-2105

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