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Table 1 Performance of NER Systems

From: A graph-search framework for associating gene identifiers with documents

 

Token-level

Field-level

 

precis.

recall

F1

precis.

recall

F1

development set

      

likely-protein

0.816

0.313

0.452

0.667

0.268

0.382

possible-protein

0.439

0.885

0.587

0.304

0.566

0.396

dictionary

0.501

0.469

0.484

0.245

0.439

0.314

YAPEX test

      

likely-protein

0.949

0.648

0.770

0.872

0.621

0.725

possible-protein

0.490

0.974

0.652

0.472

0.825

0.600

YAPEX system

   

0.678

0.664

0.671

  1. Performance of the NER systems on the mouse development corpus and the YAPEX test corpus. The row labeled "dictionary" is for simple dictionary lookup using the mouse synonym list. The row labeled "YAPEX system" is from [15].
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BMC Bioinformatics

ISSN: 1471-2105

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