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Table 2 Top biases for the the thirteen metazoan proteomes (*)

From: Exhaustive assignment of compositional bias reveals universally prevalent biased regions: analysis of functional associations in human and Drosophila

Mammals

Hsap

 

Ptro

 

Mmus

 

Rnor

         

{C}

0.036

{GP}

0.042

{C}

0.039

{C}

0.039

        

{P}

0.031

{C}

0.037

{P}

0.020

{GP}

0.023

        

{GP}

0.024

{P}

0.020

{GP}

0.020

{P}

0.020

        

{Q}

0.009

{ED}

0.009

{Q}

0.011

{Q}

0.013

        

{G}

0.008

{Q}

0.009

{ED}

0.009

{ED}

0.009

        

{E}

0.008

{G}

0.009

{E}

0.008

{KE}

0.006

        

{S}

0.008

{S}

0.007

{PQ}

0.005

{E}

0.005

        

{ED}

0.007

{E}

0.007

{CG}

0.005

{RS}

0.005

        

{PG}

0.007

{QP}

0.007

{PG}

0.004

{S}

0.004

        

{QP}

0.006

{PG}

0.006

{G}

0.004

{PG}

0.004

        

Total

4903

Total

3812

Total

3721

Total

3169

        

Non-mammals

Ggal

 

Frub

 

Tnig

 

Drer

 

Agam

 

Amel

 

Dmel

 

Cele

 

{C}

0.056

{HT}

0.099

{C}

0.034

{C}

0.042

{C}

0.035

{C}

0.052

{Q}

0.070

{GP}

0.035

{GP}

0.048

{CV}

0.081

{GP}

0.032

{GP}

0.038

{GP}

0.014

{GP}

0.030

{QH}

0.055

{C}

0.030

{P}

0.019

{GP}

0.048

{P}

0.016

{P}

0.017

{T}

0.012

{P}

0.016

{C}

0.020

{T}

0.021

{EKQL}

0.008

{C}

0.046

{CV}

0.014

{T}

0.010

{Q}

0.012

{F}

0.010

{T}

0.014

{Q}

0.012

{Q}

0.007

{P}

0.016

{HT}

0.013

{ED}

0.010

{QH}

0.009

{R}

0.007

{N}

0.011

{KED}

0.010

{S}

0.006

{Q}

0.009

{Q}

0.007

{G}

0.008

{G}

0.009

{G}

0.007

{H}

0.009

{QC}

0.009

{EKQ}

0.006

{S}

0.009

{PS}

0.007

{Q}

0.007

{RDE}

0.007

{FIY}

0.007

{S}

0.007

{ED}

0.009

{RS}

0.005

{CD}

0.008

{ED}

0.007

{S}

0.007

{PIE}

0.007

{CN}

0.007

{G}

0.006

{KE}

0.008

{QP}

0.005

{E}

0.008

{E}

0.006

{RS}

0.005

{P}

0.005

{EKAQ LRND}

0.006

{QPH}

0.006

{PG}

0.007

{EQKL}

0.005

{ED}

0.007

{PG}

0.006

{HC}

0.005

{RS}

0.005

{A}

0.005

{P}

0.006

{RS}

0.007

Total

2743

Total

5639

Total

2609

Total

3669

Total

1304

Total

2340

Total

3394

Total

2295

  1. (*) The proteomes are given an abbreviation derived from the Latin name of the organism, i.e., Hsap for human, Rnor for rat, Drer for zebrafish, etc. The Total Number of CB regions is listed at the bottom for each proteome. For each bias (denoted by a CB signature), the fraction of the total number of CB regions is given; the regions are listed in decreasing order of abundance.