From: CpGcluster: a distance-based algorithm for CpG-island detection
Program | Sn ± SD | Sp ± SD | CC ± SD | Hit* [%] ± SD |
---|---|---|---|---|
Newcpgreport | 0.545 ± 0.002 | 0.973 ± 0.002 | 0.725 ± 0.005 | 87.000 ± 0.540 |
CpGProD | 0.918 ± 0.003 | 0.657 ± 0.003 | 0.772 ± 0.006 | 94.675 ± 0.808 |
CpGIS | 0.832 ± 0.003 | 0.756 ± 0.007 | 0.789 ± 0.013 | 86.675 ± 1.528 |
CpGIE | 0.910 ± 0.002 | 0.667 ± 0.003 | 0.775 ± 0.006 | 94.650 ± 0.810 |
CpGED | 0.819 ± 0.013 | 0.584 ± 0.004 | 0.685 ± 0.005 | 84.075 ± 1.191 |
CpGcluster (d t = median, or 44 bp) | 0.655 ± 0.003 | 0.976 ± 0.005 | 0.797 ± 0.009 | 95.475 ± 0.870 |
CpGcluster (d t = 75th percentile, or 94 bp) | 0.866 ± 0.006 | 0.832 ± 0.009 | 0.846 ± 0.006 | 95.050 ± 0.643 |