Table 6 Statistics of CpG distances and %G+C in human and mouse chromosomes
From: CpGcluster: a distance-based algorithm for CpG-island detection
hg17 | mm7 | |||||
|---|---|---|---|---|---|---|
Chromosome | median | mean | %G+C | median | mean | %G+C |
1 | 40 | 97.7 | 41.73 | 63 | 129.1 | 41.12 |
2 | 46 | 109.4 | 40.23 | 56 | 116.4 | 42.07 |
3 | 52 | 119.1 | 39.69 | 63 | 129.9 | 40.44 |
4 | 53 | 127.1 | 38.21 | 52 | 113.1 | 42.29 |
5 | 49 | 116.9 | 39.52 | 51 | 108.4 | 42.51 |
6 | 47 | 112.6 | 39.60 | 61 | 124.8 | 41.39 |
7 | 40 | 98.6 | 40.72 | 53 | 113.9 | 43.12 |
8 | 46 | 108.3 | 40.17 | 52 | 109.5 | 42.35 |
9 | 39 | 96.8 | 41.36 | 54 | 111.5 | 42.70 |
10 | 41 | 96.2 | 41.58 | 54 | 113.9 | 41.38 |
11 | 41 | 100.6 | 41.57 | 47 | 101.0 | 43.82 |
12 | 41 | 101.2 | 40.80 | 59 | 121.2 | 41.65 |
13 | 50 | 118.1 | 38.52 | 57 | 117.5 | 41.61 |
14 | 42 | 101.7 | 40.89 | 62 | 126.5 | 41.10 |
15 | 40 | 92.6 | 42.21 | 54 | 114.5 | 41.95 |
16 | 31 | 70.9 | 44.79 | 61 | 124.7 | 40.90 |
17 | 29 | 66.4 | 45.53 | 49 | 106.3 | 42.61 |
18 | 47 | 109.2 | 39.79 | 59 | 120.2 | 41.43 |
19 | 23 | 51.8 | 48.36 | 49 | 103.2 | 42.73 |
20 | 36 | 81.9 | 44.13 | – | – | – |
21 | 37 | 90.9 | 40.88 | – | – | – |
22 | 28 | 59.5 | 47.96 | – | – | – |
X | 52 | 121.0 | 39.46 | 81 | 168.2 | 39.22 |
Y | 49 | 119.9 | 39.85 | 67 | 155.1 | 39.19 |