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Figure 5 | BMC Bioinformatics

Figure 5

From: A summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database

Figure 5

Coefficient of Variation and Correlations for summarization methods. The distributions of a) probe set-specific coefficients of variation resulting from log2 MAS5, Classic RMA, and Full refRMA summarization schemes on 30 liver normal samples and b) correlations of all possible pair-wise comparisons across samples using all probe sets on the HG U133A GeneChip. The two small bumps in the correlation Classic RMA plot are discussed in the manuscript body.

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