Table 3 CAFTAN results for the annotated VEGA cDNAs and for the 3000 randomly generated cDNAs.
From: CAFTAN: a tool for fast mapping, and quality assessment of cDNAs
CDNA | Known VEGA Transcripts | Random Sequences | ||
|---|---|---|---|---|
| Â | Number | Percent | Number | Percent |
Good single exon cDNA | 154 | 2.58 % | 46 | 1.53 % |
Good multiple exon cDNA | 4911 | 82.53 % | 1 | 0.03 % |
Questionable single exon cDNA | 0 | 0.00 % | 0 | 0 % |
Questionable multiple exon cDNA | 57 | 0.96 % | 0 | 0 % |
Bad single exon cDNA | 37 | 0.62 % | 115 | 3.83 % |
Bad multiple exon cDNA | 791 | 13.29 % | 2666 | 88.86 % |
Not mapped | 0 | 0.00 % | 172 | 5.73 % |
Total | 5950 | Â | 3000 | Â |