Skip to main content

Table 2 Characteristics of synthetic datasets.

From: GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima

Condition

W m = 8, N = 12, W b = 600

d = 1

W m = 12, N = 10, W b = 1000

d = 1

W m = 12, N = 10, W b = 1000

d = 2

W m = 16, N = 10, W b = 1000

d = 1

W m = 16, N = 10, W b = 1000

d = 2

W m = 12, N = 10, W b = 1000

d = 3 1

  1. The parameters used for dataset generation in the six synthetic conditions: W m , N, W b , and d denote the width of the pattern, the number of input sequences, the length of the background sequences, and the number of mutations in a pattern occurrence, respectively.
  2. 1 This was used only in "Comparison with fixed-T methods".