Skip to main content

Table 8 Representing SDRF from Table 2 by a set of two SDRF files: first spreadsheet.

From: A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB

Sample ID Characteristics [Organism] Characteristics [OrganismPart] Protocol REF Extract ID Protocol REF Label Hybridization ID
liver 1 Homo sapiens liver P-XMPL-1 Extract 1 P-XMPL-3 Cy3 Hyb 1
liver 2 Homo sapiens liver P-XMPL-1 Extract 2 P-XMPL-3 Cy3 Hyb 1
kidney 1 Homo sapiens kidney P-XMPL-1 Extract 3 P-XMPL-3 Cy3 Hyb 2
kidney 2 Homo sapiens kidney P-XMPL-1 Extract 4 P-XMPL-3 Cy3 Hyb 2
brain 1 Homo sapiens brain P-XMPL-1 Extract 5 P-XMPL-3 Cy3 Hyb 3
brain 2 Homo sapiens brain P-XMPL-1 Extract 6 P-XMPL-3 Cy3 Hyb 3
     Extract reference P-XMPL-3 Cy5 Hyb 1
     Extract reference P-XMPL-3 Cy5 Hyb 2
     Extract reference P-XMPL-3 Cy5 Hyb 3
  1. Such splitting of an SDRF spreadsheet can be done on any ID column, which becomes the last column in the first spreadsheet (this table) and is repeated as the first column in the second spreadsheet (Table 9).