From: Effects of filtering by Present call on analysis of microarray experiments
Unfiltered (total) | FP>0 sig254 RMA4.25 | FP25 sig375 RMA4.75 | FP50 sig475 RMA5.03 | FP75 sig593 RMA5.30 | FP100 sig795 RMA5.65 | |
---|---|---|---|---|---|---|
IFN Data | ||||||
Fraction Present (MAS5) | 1230 | 20 | 30 | 49 | 84 | 165 |
Average Signal (MAS5) | 1230 | 8 | 26 | 43 | 57 | 112 |
Fraction Present (RMA) | 1641 | 53 | 92 | 143 | 218 | 334 |
Average RMA (RMA) | 1641 | 92 | 161 | 205 | 252 | 346 |
Unfiltered (total) | FP>0 sig200 RMA5.05 | FP25 sig265 RMA5.47 | FP50 sig323 RMA5.70 | FP75 sig400 RMA5.95 | FP100 sig475 RMA6.17 | |
Vitamin A Data | ||||||
Fraction Present (MAS5) | 168 | 8 | 10 | 10 | 14 | 17 |
Average Signal (MAS5) | 168 | 5 | 9 | 13 | 19 | 24 |
Fraction Present (RMA) | 177 | 5 | 7 | 10 | 14 | 18 |
Average Signal (RMA) | 177 | 13 | 17 | 22 | 28 | 31 |