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Table 2 Summary of the curation made to the Alon and Ma data.

From: The comprehensive updated regulatory network of Escherichia coli K-12

 

RegulonDB

EcoCyc

Numbers from Fig 1 in Ma et al. unique to each database

370

336

Repetitions coming from heterodimer regulators (hupB, ihfB, rcsB)

29

19

Sigma factor regulated genes

88

8

Curated and present in both databases

184

294

Final discrepancies – different synonyms, etc (see text)

69

77