Table 3 Number of additional direction assignments required to eliminate remaining thermodynamically infeasible energy production
From: Systematic assignment of thermodynamic constraints in metabolic network models
common attributes | standard procedure | standard procedure with consideration of final electron acceptors |
|---|---|---|
quinone pool reductions | 15 | - |
transporters | 9 | 8 |
NTP production | 14 | 12 |
NADH/NADPH production | 5 | 4 |
O2 production | 2 | 1 |
CO2 consumption | 4 | 4 |
NMP synthesis | 7 | 7 |
other | 3 | 3 |
sum | 59 | 39 |