Table 1 Data structure for SNP rs1106577 and DNA sample Coriell NA17102 (CC) (CC-chart in Figure 1)
From: Dynamic variable selection in SNP genotype autocalling from APEX microarray data
Spot ID | Probe ID | Expected allele ID | A | C | G | T |
|---|---|---|---|---|---|---|
Spot 1 | APEX_LEFT | C and/or T | 732 | 17003 | 258 | 667 |
Spot 2 | APEX_LEFT | C and/or T | 965 | 28290 | 348 | 1046 |
Spot 3 | APEX_RIGHT | G and/or A | 190 | 85 | 1198 | 233 |
Spot 4 | APEX_RIGHT | G and/or A | 353 | 104 | 2923 | 269 |
Spot 5 | ASO_1LEFT | T | 109 | 5284 | 80 | 45700 |
Spot 6 | ASO_1LEFT | T | 107 | 5456 | 83 | 45713 |
Spot 7 | ASO_2LEFT | T | 90 | 88 | 20 | 182 |
Spot 8 | ASO_2LEFT | T | 76 | 106 | 22 | 222 |
Spot 9 | ASO_1RIGHT | G | 288 | 182 | 2346 | 992 |
Spot 10 | ASO_1RIGHT | G | 369 | 209 | 3908 | 1098 |
Spot 11 | ASO_2RIGHT | G | 138 | 68 | 166 | 187 |
Spot 12 | ASO_2RIGHT | G | 151 | 68 | 212 | 193 |