Table 1 The most enhanced gene ontology terms in patterns 13 and 15. Each term is presented together with a measure of how overrepresented it is compared to a random draw of the same number of genes. These were also confirmed to be significant by hypergeometric tests.
From: Determination of strongly overlapping signaling activity from microarray data
Pattern 13 | Pattern 15 | ||
|---|---|---|---|
Pheromone response, mating-type determination | 6.31 | Transposable elements, viral and plasmid | 8.42 |
development | 6.09 | Pheromone response, mating-type determination | 7.26 |
Fungal/microorganism development | 6.09 | Transmembrane signal transduction | 6.41 |
Mating (fertilization) | 6.09 | G-protein mediated signal transduction | 6.10 |
Transmembrane signal transduction | 4.98 | development | 5.69 |
Chemoperception and response | 4.47 | Fungal/microorganism development | 5.69 |
Cellular sensing and response | 4.25 | Mating (fertilization) | 5.69 |
Interaction with cellular environment | 2.94 | Chemoperception and response | 5.47 |
Meiosis | 2.86 | Cellular sensing and response | 5.21 |
Cell growth/morphogenesis | 2.77 | Cellular communications | 4.45 |
Cellular communications | 2.77 | Enzyme mediated signal transduction | 3.81 |
Development of asco- basidio- or zygospore | 2.57 | Interaction with cellular environment | 3.61 |
Enzyme mediated signal transduction | 2.37 | Enzyme activator | 3.56 |
Protein kinase cascades | 2.37 | Intracellular signaling | 3.14 |
G protein mediated signal transduction | 2.37 | Budding, cell polarity, filamentation | 2.87 |