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Table 1 Comparison of PSI-BLAST and RankProp variants. The table lists ROC1, ROC10 and ROC50 scores, averaged across 2899 SCOP domains in the test set, for PSI-BLAST and five variants of the RankProp algorithm.

From: Protein Ranking by Semi-Supervised Network Propagation

  ROC1 ROC10 ROC50
PSI-BLAST 0.5973 0.6167 0.6406
RankProp σ = 10 0.5964 0.6658 0.7169
RankProp σ = 100 0.5924 0.6671 0.7249
RankProp σ = 1000 0.6040 0.6661 0.6999
Probabilistic RankProp 0.6145 0.6660 0.7195
Adaptive RankProp 0.6510 0.7000 0.7420