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Table 1 Topology-Index Histogram results are shown for Vibrio Cholerae. The N = 400 set correspond to indexing with ORFs greater than 400 bases long. Similarly, the N = 200 set correspond to indexing with ORFs greater than 200 bases long.

From: Hidden Markov Model Variants and their Application

N = 400

 

N = 200

 

Score

Count

Score

Count

0

1653287

0

846889

1000

649241

1000

1017629

2000

400

2000

1554

10000

630232

10000

954394

11000

27986

11000

138817

20000

3

12000

161

  

20000

1700

  

21000

5

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BMC Bioinformatics

ISSN: 1471-2105

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