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Table 3 List of significant biological processes generated with GOFFA Terms in kidney of rats treated with aristolochic acid (p < 0.01).

From: Gene Expression Profiles Distinguish the Carcinogenic Effects of Aristolochic Acid in Target (Kidney) and Non-target (Liver) Tissues in Rats

Go term

GO ID

P value (Average)

None of Genes Involved

Response to external stimulus

GO:0009605

0.000000

55

Amino acid and derivative metabolism

GO:0006519

0.000000

32

Organic acid metabolism

GO:0006082

0.000000

45

Defense response

GO:0006952

0.000000

57

Response to biotic stimulus

GO:0009607

0.000000

59

Carboxylic acid metabolism

GO:0019752

0.000000

45

Response to wounding

GO:0009611

0.000000

40

Immune response

GO:0006955

0.000001

50

Amino acid metabolism

GO:0006520

0.000001

25

Amine metabolism

GO:0009308

0.000001

32

Nitrogen compound metabolism

GO:0006807

0.000002

33

Response to external biotic stimulus

GO:0043207

0.000009

36

Response to stress

GO:0006950

0.00002

64

Response to pest, pathogen or parasite

GO:0009613

0.000024

34

Amino acid biosynthesis

GO:0008652

0.000028

9

Induction of programmed cell death

GO:0012502

0.000084

19

Induction of apoptosis

GO:0006917

0.000084

19

Positive regulation of biological process

GO:0048518

0.000162

48

Positive regulation of programmed cell death

GO:0043068

0.000245

19

Positive regulation of apoptosis

GO:0043065

0.000245

19

Amine biosynthesis

GO:0009309

0.000247

11

Nitrogen compound biosynthesis

GO:0044271

0.000247

11

Sulfur amino acid metabolism

GO:0000096

0.000430

6

Generation of precursor metabolites and energy

GO:0006091

0.000444

39

Complement activation, classical pathway

GO:0006958

0.000645

6

Positive regulation of cellular process

GO:0048522

0.000699

39

Positive regulation of physiological process

GO:0043119

0.000849

37

Humoral defense mechanism (sensu Vertebrata)

GO:0016064

0.000874

10

Positive regulation of cellular physiological process

GO:0051242

0.000902

35

Regulation of programmed cell death

GO:0043067

0.001275

27

Regulation of lymphocyte proliferation

GO:0050670

0.001318

6

Regulation of immune response

GO:0050776

0.001579

11

Amine catabolism

GO:0009310

0.001671

9

Regulation of lymphocyte activation

GO:0051249

0.001739

8

Regulation of apoptosis

GO:0042981

0.002010

26

Amino acid catabolism

GO:0009063

0.002152

8

Regulation of cell activation

GO:0050865

0.002152

8

Nitrogen compound catabolism

GO:0044270

0.002422

9

Sulfur metabolism

GO:0006790

0.002637

8

Aspartate family amino acid metabolism

GO:0009066

0.002692

4

Negative regulation of biological process

GO:0048519

0.002726

45

Electron transport

GO:0006118

0.002754

23

Cellular catabolism

GO:0044248

0.002821

27

Xenobiotic metabolism

GO:0006805

0.003190

6