Table 2 Parameter values of the reversible enzyme reaction model in Eq. 2. The translation of activation energies into kinetic coefficients are performed based on Table 1(a). Keq = a1a2b-1/a-1b2b1
From: Particle simulation approach for subcellular dynamics and interactions of biological molecules
Activation energy [kBT] | (a) (Figure 6A) | (b) (Figure 6B) | Kinetic coefficients | (c) (Figure 6A) | (d) (Figure 6B) |
|---|---|---|---|---|---|
ΔEf1 | 0.1 | 1.7 | a1 [nM-1sec-1] | 5.73 | 1.16 |
ΔEr1 | 0.1 | 1.7 | b1 [nM-1sec-1] | 5.73 | 1.16 |
ΔEf2 | 2.3 | 3.9 | a-1 [sec-1] | 2.79 × 103 | 5.62 × 102 |
ΔEr2 | 4.6 | 4.6 | b-1 [sec-1] | 2.79 × 102 | 2.79 × 102 |
ΔEf3 | 10.8 | 10.8 | a2 [sec-1] | 1.02 × 101 | 1.02 × 101 |
ΔEr3 | 12.4 | 10.8 | b2 [sec-1] | 2.06 | 1.02 × 101 |
ΔG | 0.7 | 0.7 | K eq | 0.50 | 0.50 |