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Table 1 miRNA target prediction tools. A list of current miRNA target prediction tools, with access details. Note that only RNAHybrid and miRanda provide source code for download.

From: MicroTar: predicting microRNA targets from RNA duplexes

Program Interface Reference(s)
miRanda Web access to predictions, downloadable software
http://www.microrna.org/
[17]
PicTar Web access to predictions
http://pictar.bio.nyu.edu/
[13,14]
TargetScan Web access to predictions
http://www.targetscan.org/
[10]
RNAHybrid Web submission, Web API, downloadable software
http://bibiserv.techfak.uni-bielefeld.de/rnahybrid/
[15]
MicroInspector Web submission
http://mirna.imbb.forth.gr/microinspector/
[25]
DIANA-microT Web submission
http://www.diana.pcbi.upenn.edu/
[26]
Targetboost Web access to predictions
https://demo1.interagon.com/targetboost/
[27]
[Stark et al.] Article supplementary data [28]
[Robins et al.] Article supplementary data [16]