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Table 1 Comparison of results from Matchprot and Dali using Fischer's and Novotny's Benchmark Dataset.

From: Projections for fast protein structure retrieval

Data set/Classifn.

Total pairs

Better

Worse

Level

Fischer Novotny et. al.

68

17

18

33

1.10.40

21

8

1

12

1.10.164

10

2

0

8

1.25.30

21

3

0

18

2.30 110

6

1

2

3

2.40.100

28

4

3

21

2.100.10

15

5

4

6

3.10.70

10

0

2

8

3.40.91

6

6

0

0

3.70.10

15

1

3

11

2.40.20

21

1

4

16