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Figure 7 | BMC Bioinformatics

Figure 7

From: Interpretation of multiple probe sets mapping to the same gene in Affymetrix GeneChips

Figure 7

Mapping of individual probes in probe sets 1369117_at (red, grey lines), 1370775_a_at (blue lines) and 1369116_a_at (turquoise lines) to genomic sequence of the rat calcitonin alpha/CGRP gene. The arrow shows the direction of transcription. The introns are represented by black dotted lines and are not drawn to scale. The fifth probe in the 1369117_at probe set (grey line) does not match the genomic sequence perfectly – there is a single base mismatch between the probe sequence and the genomic sequence. Genomic sequence was from the UCSC June 2003 rat assembly [10].

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