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Table 2 Percentage of verified probe sets for all Affymetrix human, mouse and rat arrays analyzed

From: A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat

array (a) (b) (c) (d)
HC-G110 80 91 97 Feb 19, 2002
HG-Focus 86 97 99 Jul 02, 2002
HG-U133A 2.0 84 96 98 Nov 07, 2003
HG-U133A 84 96 98 Feb 19, 2002
HG-U133B 80 96 98 Feb 19, 2002
HG-U133 Plus 2.0 82 96 98 Nov 07, 2003
HG-U95Av2 84 93 97 Feb 19, 2002
HG-U95B 78 92 97 Feb 19, 2002
HG-U95C 71 85 93 Feb 19, 2002
HG-U95D 68 83 93 Feb 19, 2002
HG-U95E 71 86 93 Feb 19, 2002
HuGeneFL 68 84 94 Feb 19, 2002
Human X3P 20 25 26 Jul 19, 2004
MG-U74Av2 74 81 84 Feb 19, 2002
MG-U74Bv2 71 83 87 Feb 19, 2002
MG-U74Cv2 39 49 61 Feb 19, 2002
MOE-430A 90 95 97 Jun 18, 2003
MOE-430B 81 92 96 Jun 18, 2003
Mouse 430 2.0 85 94 97 May 25, 2004
Mouse 430A 2.0 90 95 97 Jun 18, 2003
Mu11K-A 71 82 89 Feb 19, 2002
Mu11K-B 45 53 57 Feb 19, 2002
RAE-230A 80 94 97 Jun 19, 2003
RAE-230B 69 89 94 Jun 19, 2003
Rat 230 2.0 64 89 93 Jul 20, 2004
RG-U34A 60 69 74 Feb 19, 2002
RG-U34B 20 28 33 Feb 19, 2002
RG-U34C 22 32 38 Feb 19, 2002
RN-U34 81 87 91 Feb 19, 2002
RT-U34 66 73 79 Feb 19, 2002
  1. (a) all probe sequences are sequence verified; (b) all probes, except at most two per probe set, are sequence verified; (c) all probes, except at most two per probe set, are sequence verified allowing for one or two mismatches between probe and target gene; (d) date of release of the array.
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