Figure 5
From: An adaptive bin framework search method for a beta-sheet protein homopolymer model
Distribution of run-times for all algorithms required to reach sub-optimal conformations for homopolymers of length 32 and 64. Distribution of run-times required by MC, REMC, PHAT and BINMC to reach sub-optimal conformations with energy -158 for the homopolymer of length 32 (part a) -370 for the homopolymer of length 64 (part b), based on 100 independent runs on our reference machine, each of which reached the target energy value. We fitted the run-time distribution (RTD) of BINMC for the homopolymer of length 64 with exponential distribution, to illustrate that the respective RTD is approximately exponential. (The same holds for all other RTDs shown in these plots.)