TY - BOOK AU - Hayes, M. H. PY - 1996 DA - 1996// TI - Statistical digital signal processing and modeling PB - John Wiley and Sons CY - Inc ID - Hayes1996 ER - TY - JOUR AU - Kay, S. M. AU - Marple, S. L. PY - 1981 DA - 1981// TI - Spectrum analysis-A modern perspective JO - Proceeding of IEEE VL - 69 UR - https://doi.org/10.1109/PROC.1981.12184 DO - 10.1109/PROC.1981.12184 ID - Kay1981 ER - TY - JOUR AU - Spellman, T. S. AU - Sherlock, G. AU - Zhang, M. Q. AU - Iyer, V. R. AU - Anders, K. AU - Eisen, M. B. AU - Brown, P. O. AU - Botstein, D. AU - Futcher, B. PY - 1998 DA - 1998// TI - Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisia by microarray hybridization JO - Mol Biol Cell VL - 9 UR - https://doi.org/10.1091/mbc.9.12.3273 DO - 10.1091/mbc.9.12.3273 ID - Spellman1998 ER - TY - JOUR AU - Chu, S. AU - DeRisi, J. AU - Eisen, M. AU - Mulholland, J. AU - Botstein, D. AU - Brown, P. O. AU - Herskowitz, I. PY - 1998 DA - 1998// TI - The transcriptional program of sporulation in budding yeast JO - Science VL - 282 UR - https://doi.org/10.1126/science.282.5389.699 DO - 10.1126/science.282.5389.699 ID - Chu1998 ER - TY - JOUR AU - Eisen, M. B. AU - Spellman, P. T. AU - Brown, P. O. AU - Botstein, D. PY - 1998 DA - 1998// TI - Cluster analysis and display of genome-wide expression patterns JO - PNAS VL - 95 UR - https://doi.org/10.1073/pnas.95.25.14863 DO - 10.1073/pnas.95.25.14863 ID - Eisen1998 ER - TY - JOUR AU - Bø, T. H. AU - Dysvik, B. AU - Jonassen, I. PY - 2004 DA - 2004// TI - LSimpute: accurate estimation of missing values in microarray data with least squares method JO - Nucleic Acids Research VL - 32 UR - https://doi.org/10.1093/nar/gnh026 DO - 10.1093/nar/gnh026 ID - Bø2004 ER - TY - JOUR AU - Gan, X. AU - Liew, A. W. C. AU - Yan, H. PY - 2006 DA - 2006// TI - Microarray missing data imputation based on a set theoretic framework and biological knowledge JO - Nucleic Acids Research VL - 34 UR - https://doi.org/10.1093/nar/gkl047 DO - 10.1093/nar/gkl047 ID - Gan2006 ER - TY - JOUR AU - Lu, X. AU - Zhang, W. AU - Qin, Z. H. AU - Kwast, K. E. AU - Liu, J. S. PY - 2004 DA - 2004// TI - Statistical resynchronization and Bayesian detection of periodically expressed genes JO - Nucleic Acids Research VL - 32 UR - https://doi.org/10.1093/nar/gkh205 DO - 10.1093/nar/gkh205 ID - Lu2004 ER - TY - JOUR AU - Ahdesmäki, M. AU - Lähdesmäki, H. AU - Pearson, R. AU - Huttunen, H. AU - Yli-Harja, O. PY - 2005 DA - 2005// TI - Robust detection of periodic time series measured from biological systems JO - BMC Bioinformatics VL - 6 UR - https://doi.org/10.1186/1471-2105-6-117 DO - 10.1186/1471-2105-6-117 ID - Ahdesmäki2005 ER - TY - JOUR AU - Chen, J. PY - 2005 DA - 2005// TI - Identification of significant periodic genes in microarray gene expression data JO - BMC Bioinformatics VL - 6 UR - https://doi.org/10.1186/1471-2105-6-286 DO - 10.1186/1471-2105-6-286 ID - Chen2005 ER - TY - JOUR AU - Wichert, S. AU - Fokianos, K. AU - Strimmer, K. PY - 2004 DA - 2004// TI - Identifying periodically expressed transcripts in microarray time series data JO - Bioinformatics VL - 20 UR - https://doi.org/10.1093/bioinformatics/btg364 DO - 10.1093/bioinformatics/btg364 ID - Wichert2004 ER - TY - JOUR AU - Luan, Y. AU - Li, H. PY - 2004 DA - 2004// TI - Model-based methods for identifying periodically expressed genes based on time course microarray gene expression data JO - Bioinformatics VL - 20 UR - https://doi.org/10.1093/bioinformatics/btg413 DO - 10.1093/bioinformatics/btg413 ID - Luan2004 ER - TY - JOUR AU - Ruf, T. PY - 1999 DA - 1999// TI - The Lomb-Scargle Periodogram in biological rhythm research: Analysis of incomplete and unequally spaced time-series JO - Biological Rhythm Research VL - 30 UR - https://doi.org/10.1076/brhm.30.2.178.1422 DO - 10.1076/brhm.30.2.178.1422 ID - Ruf1999 ER - TY - JOUR AU - Bohn, A. AU - Hinderlich, S. AU - Hutt, M. T. AU - Kaiser, F. AU - Luttge, U. PY - 2003 DA - 2003// TI - Identification of rhythmic subsystems in the circadian cycle of crassulacean acid metabolism under thermoperiodic perturbations JO - Biol Chem VL - 384 UR - https://doi.org/10.1515/BC.2003.080 DO - 10.1515/BC.2003.080 ID - Bohn2003 ER - TY - JOUR AU - Glynn, E. F. AU - Chen, J. AU - Mushegian, A. R. PY - 2006 DA - 2006// TI - Detecting periodic patterns in unevenly spaced gene expression time series using Lomb-Scargle periodograms JO - Bioinformatics VL - 22 UR - https://doi.org/10.1093/bioinformatics/bti789 DO - 10.1093/bioinformatics/bti789 ID - Glynn2006 ER - TY - BOOK AU - Press, W. H. AU - Teukolsky, S. A. AU - Vetterling, W. T. AU - Flannery, B. P. PY - 1995 DA - 1995// TI - Numerical Recipes in C ID - Press1995 ER - TY - JOUR AU - Lomb, N. R. PY - 1976 DA - 1976// TI - Least-squares frequency analysis of unequally spaced data JO - Astrophys Space Sci VL - 39 UR - https://doi.org/10.1007/BF00648343 DO - 10.1007/BF00648343 ID - Lomb1976 ER - TY - CHAP AU - Benedetto, J. J. ED - Chui, C. K. PY - 1992 DA - 1992// TI - Irregular sampling and frames BT - wavelets: A Tutorial in Theory and Applications UR - https://doi.org/10.1016/B978-0-12-174590-5.50020-4 DO - 10.1016/B978-0-12-174590-5.50020-4 ID - Benedetto1992 ER - TY - JOUR AU - Chen, W. AU - Itoh, S. AU - Shiki, J. PY - 1998 DA - 1998// TI - Irregular sampling theorem for wavelet subspaces JO - IEEE Trans Information Theory VL - 44 UR - https://doi.org/10.1109/18.669187 DO - 10.1109/18.669187 ID - Chen1998 ER - TY - JOUR AU - Chen, W. AU - Itoh, S. AU - Shiki, J. PY - 2002 DA - 2002// TI - On sampling in shift invariant spaces JO - IEEE Trans Information Theory VL - 48 UR - https://doi.org/10.1109/TIT.2002.802646 DO - 10.1109/TIT.2002.802646 ID - Chen2002 ER - TY - JOUR AU - Ericsson, S. AU - Grip, N. PY - 2005 DA - 2005// TI - An analysis method for sampling in shift-invariant spaces JO - Int J Wavelet Multi Information Processing VL - 3 UR - https://doi.org/10.1142/S0219691305000877 DO - 10.1142/S0219691305000877 ID - Ericsson2005 ER - TY - JOUR AU - Goh, S. S. AU - Ong, I. G. H. PY - 1995 DA - 1995// TI - Reconstruction of bandlimited signals from irregular samples JO - Signal Processing VL - 46 UR - https://doi.org/10.1016/0165-1684(95)00091-0 DO - 10.1016/0165-1684(95)00091-0 ID - Goh1995 ER - TY - JOUR AU - Liu, Y. PY - 1996 DA - 1996// TI - Irregular sampling for spline wavelet subspaces JO - IEEE Trans Information Theory VL - 42 UR - https://doi.org/10.1109/18.485731 DO - 10.1109/18.485731 ID - Liu1996 ER - TY - JOUR AU - Xian, J. AU - Lin, W. PY - 2004 DA - 2004// TI - Sampling and reconstruction in time-warped spaces and their applications JO - Appl Math Comput VL - 157 UR - https://doi.org/10.1016/j.amc.2003.08.031 DO - 10.1016/j.amc.2003.08.031 ID - Xian2004 ER - TY - JOUR AU - Xian, J. AU - Luo, S. P. AU - Lin, W. PY - 2006 DA - 2006// TI - Weighted sampling and signal reconstruction in spline subspaces JO - Signal Processing VL - 86 UR - https://doi.org/10.1016/j.sigpro.2005.05.013 DO - 10.1016/j.sigpro.2005.05.013 ID - Xian2006 ER - TY - JOUR AU - Grochenig, K. AU - Schwab, H. PY - 2002 DA - 2002// TI - Fast local reconstruction methods for nonuniform sampling in shift invariant spaces JO - SIAM Journal on Matrix Analysis and Applications VL - 24 UR - https://doi.org/10.1137/S0895479802409067 DO - 10.1137/S0895479802409067 ID - Grochenig2002 ER - TY - JOUR AU - Bozdech, Z. AU - Llinas, M. AU - Pulliam, B. L. AU - Wong, E. D. AU - Zhu, J. AU - DeRisi, J. L. PY - 2003 DA - 2003// TI - The Transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum JO - PLoS Biology VL - 1 UR - https://doi.org/10.1371/journal.pbio.0000005 DO - 10.1371/journal.pbio.0000005 ID - Bozdech2003 ER - TY - JOUR AU - Lichtenberg, U. AU - Jensen, L. J. AU - Fausbøll, A. AU - Jensen, T. S. AU - Bork, P. AU - Brunak, S. PY - 2005 DA - 2005// TI - Comparison of computational methods for the identification of cell cycle-regulated genes JO - Bioinformatics VL - 21 UR - https://doi.org/10.1093/bioinformatics/bti093 DO - 10.1093/bioinformatics/bti093 ID - Lichtenberg2005 ER - TY - JOUR AU - Andersson, C. R. AU - Isaksson, A. AU - Gustafsson, M. G. PY - 2006 DA - 2006// TI - Bayesian detection of periodic mRNA time profiles without use of training examples JO - BMC Bioinformatics VL - 7 UR - https://doi.org/10.1186/1471-2105-7-63 DO - 10.1186/1471-2105-7-63 ID - Andersson2006 ER - TY - JOUR AU - Dowski, E. R. AU - Whitmore, C. A. AU - Avery, S. K. PY - 1988 DA - 1988// TI - Estimation of randomly sampled sinusoids in additive noise JO - IEEE Trans Acoustics Speech Signal Processing VL - 36 UR - https://doi.org/10.1109/29.9035 DO - 10.1109/29.9035 ID - Dowski1988 ER - TY - JOUR AU - Yeung, L. K. AU - Szeto, L. K. AU - Liew, A. W. C. AU - Yan, H. PY - 2004 DA - 2004// TI - Dominant spectral component analysis for transcriptional regulations using microarray time-series data JO - Bioinformatics VL - 20 UR - https://doi.org/10.1093/bioinformatics/btg479 DO - 10.1093/bioinformatics/btg479 ID - Yeung2004 ER - TY - BOOK AU - Schumarker, L. L. PY - 1981 DA - 1981// TI - Spline functions: Basic Theory PB - Wiley-Interscience CY - New York ID - Schumarker1981 ER - TY - JOUR AU - Benjamini, Y. AU - Hochberg, Y. PY - 1995 DA - 1995// TI - Controlling the false discovery rate: a practical and powerful approach to multiple testing JO - JR Statist Soc B VL - 57 ID - Benjamini1995 ER - TY - JOUR AU - Fisher, R. A. PY - 1929 DA - 1929// TI - Tests of significance in Harmonic Analysis JO - Proceedings of the Royal Society of London, Series A VL - 125 UR - https://doi.org/10.1098/rspa.1929.0151 DO - 10.1098/rspa.1929.0151 ID - Fisher1929 ER - TY - STD TI - Cell Cycle Regulated Yeast Genes. [http://genome-www.stanford.edu/cellcycle/data/rawdata/] UR - http://genome-www.stanford.edu/cellcycle/data/rawdata/ ID - ref35 ER - TY - STD TI - Supplementary information and datasets for reference [28]. [http://www.cbs.dtu.dk/cellcycle/yeast_benchmark/benchmark.php] UR - http://www.cbs.dtu.dk/cellcycle/yeast_benchmark/benchmark.php ID - ref36 ER - TY - STD TI - The MIPS Comprehensive Yeast Genome Database. [http://mips.gsf.de/genre/proj/yeast/] UR - http://mips.gsf.de/genre/proj/yeast/ ID - ref37 ER -