Figure 7
From: Multiple non-collinear TF-map alignments of promoter regions
Graphical representation of the MMA training. For multiple combinations of α, λ, μ and γ, we have compared the multiple TF-map alignments obtained in the proximal promoter regions from the HRCZ SET (200 nucleotides), with the alignments obtained in fragments of 200 nucleotides from intergenic (2000 nucleotides upstream of the TSS and 2000 nucleotides downstream of the transcript), 5'UTR (downstream of the TSS), 3'UTR (upstream of the end of the transcript), coding (downstream of the translation start site and considering only coding DNA), intronic (downstream of the first intron junction), and downstream (downstream of the transcription termination site) sequences.