Skip to main content

Table 2 Specificity of the TF-map alignments

From: Multiple non-collinear TF-map alignments of promoter regions

MMA ON HRCZ SET

Avg

Avg*

Max

Max*

Coding

17.15

4.66

62.60

31.37

5'UTR

10.48

3.60

35.74

26.16

Promoter

25.41

9.91

71.22

46.18

3'UTR

15.85

7.23

76.31

50.51

Intronic

8.34

3.53

48.60

22.39

Downstream

6.85

4.88

24.91

24.10

5'Intergenic

5.42

3.65

21.36

24.12

3'Intergenic

4.14

4.53

35.70

25.40

  1. Comparison between average and maximum scores of TF-map alignments of several regions from orthologous genes from the HRCZ SET and average and maximum scores of TF-map alignments of several regions from randomly shuffled genes from the HRCZ SET (denoted as *, see main text for details).
Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us