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Table 3 Significance of the TF-map alignment scores

From: Multiple non-collinear TF-map alignments of promoter regions

 

S

 

Promoter

Coding

5'UTR

3'UTR

Intronic

Downstream

5'Intergenic

3'Intergenic

PPPS

25.41

10.06

7.43

5.36

10.54

10.84

10.84

10.77

PPSS

25.41

9.79

5.03

5.24

7.50

6.31

4.98

5.61

P H S R

42.00

5.80

5.04

2.49

4.57

5.79

4.64

3.63

  1. Average score of multiple TF-map alignments of groups constituted of orthologous promoters from the HRCZ SET (denoted as P), introducing one or two non-corresponding orthologous sequences (denoted as S). Last row shows the average score of pairwise TF-map alignments that involve each human promoter (P H ) and the corresponding rodent region of the same gene (S R ) in the HRCZ SET.
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BMC Bioinformatics

ISSN: 1471-2105

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