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Table 3 Significance of the TF-map alignment scores

From: Multiple non-collinear TF-map alignments of promoter regions

  S
  Promoter Coding 5'UTR 3'UTR Intronic Downstream 5'Intergenic 3'Intergenic
PPPS 25.41 10.06 7.43 5.36 10.54 10.84 10.84 10.77
PPSS 25.41 9.79 5.03 5.24 7.50 6.31 4.98 5.61
P H S R 42.00 5.80 5.04 2.49 4.57 5.79 4.64 3.63
  1. Average score of multiple TF-map alignments of groups constituted of orthologous promoters from the HRCZ SET (denoted as P), introducing one or two non-corresponding orthologous sequences (denoted as S). Last row shows the average score of pairwise TF-map alignments that involve each human promoter (P H ) and the corresponding rodent region of the same gene (S R ) in the HRCZ SET.
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BMC Bioinformatics

ISSN: 1471-2105

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