Figure 5
From: Toward the automated generation of genome-scale metabolic networks in the SEED
Connections between subsystems in the SEED. The network of interactions that occur among 65 subsystems in the SEED used to regenerate the S. aureus model. Each box represents a subsystem. Colors correspond to the categories of metabolism described by the 2003 International Union of Biochemistry and Molecular Biology Metabolic Pathways chart (Sigma-Aldrich, http://www.sigmaaldrich.com/Area_of_Interest/Life_Science/Metabolomics/Key_Resources/Metabolic_Pathways.html). Carbohydrates, green; amino acids, red; lipids, light blue; purines and pyrimidines, purple; and vitamins, coenzymes and hormones, gray. Abbreviations within subsystem boxes are explained in Additional File 2.