Table 3 Capitalizing on common aspects of metabolism: reuse of scenarios
From: Toward the automated generation of genome-scale metabolic networks in the SEED
Category | Subsystems | Scenarios | S. aureus a | E. coli a | H. pylori a | L. lactis a |
|---|---|---|---|---|---|---|
Amino Acids | 23 | 34 | 34 | 25 | 10 | 15 |
Carbohydrates | 15 | 39 | 36 | 35 | 6 | 23 |
Cell Wall | 3 | 8 | 8 | 6 | 4 | 7 |
Lipids | 3 | 9 | 9 | 9 | 2 | 1 |
Nitrogen Metabolism | 1 | 1 | 1 | 1 | 0 | 0 |
Nucleotide Metabolism | 6 | 22 | 22 | 21 | 14 | 19 |
One Carbon | 2 | 5 | 5 | 3 | 1 | 3 |
Redox | 5 | 3 | 3 | 3 | 1 | 1 |
Sulfur | 1 | 1 | 1 | 1 | 0 | 0 |
Vitamins and Cofactors | 6 | 11 | 9 | 7 | 1 | 5 |
Totals | 65 | 133 | 128 | 111 | 40 | 74 |