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Table 3 Capitalizing on common aspects of metabolism: reuse of scenarios

From: Toward the automated generation of genome-scale metabolic networks in the SEED

Category Subsystems Scenarios S. aureus a E. coli a H. pylori a L. lactis a
Amino Acids 23 34 34 25 10 15
Carbohydrates 15 39 36 35 6 23
Cell Wall 3 8 8 6 4 7
Lipids 3 9 9 9 2 1
Nitrogen Metabolism 1 1 1 1 0 0
Nucleotide Metabolism 6 22 22 21 14 19
One Carbon 2 5 5 3 1 3
Redox 5 3 3 3 1 1
Sulfur 1 1 1 1 0 0
Vitamins and Cofactors 6 11 9 7 1 5
Totals 65 133 128 111 40 74
  1. a. Numbers represent scenarios implemented by the organism-specific reaction network in each category of metabolism.