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Figure 2 | BMC Bioinformatics

Figure 2

From: AYUMS: an algorithm for completely automatic quantitation based on LC-MS/MS proteome data and its application to the analysis of signal transduction

Figure 2

Example of an ASCII format generated by Databridge. Databridge generates an ASCII format from the raw data of LC-MS/MS analysis. The file comprises five blocks that start from the string FUNCTION 1–5. As shown above, the block that starts from FUNCTION 1 corresponds to the MS-1 raw data (#1), and the other four blocks correspond to the MS-2 raw data (#2). Each block has data on multiple spectra that start from the Scan (#3), which contains m/z values (#4), intensity values represented by integers (#5), and retention time of the LC (#6).

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BMC Bioinformatics

ISSN: 1471-2105

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