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Table 2 False negative (FN) vs. false positive (FP) rates on test and intergenic data sets for acceptor sites

From: A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana

FN(%) FP(%)
  GS-test GS-intg GSESE-test GSESE-intg
0.5 14.27 29.58 12.47 20.67
1 10.03 23.39 8.09 15.74
2 7.11 18.51 5.80 11.30
3 5.64 15.76 4.21 9.00
5 4.00 12.41 2.94 6.56
7 3.13 10.43 2.18 5.20
10 2.32 8.41 1.62 4.01
15 1.55 6.20 1.05 2.74
20 1.10 4.86 0.71 2.01
  1. Rates on test data are obtained from a 5-fold CV procedure on the ESEAra data set, while FP rates on intergenic data are averages of the FP rates obtained on INTAra by setting a threshold that would produce the same FN rate on each of the 5 fold test data.