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Table 3 False negative (FN) vs. false positive (FP) rates on test and intergenic data sets for donor sites

From: A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana

FN(%) FP(%)
  GS-test GS-intg GSESE-test GSESE-intg
0.5 11.06 17.99 9.11 12.84
1 7.58 13.11 6.24 9.35
2 5.33 9.75 4.10 6.34
3 4.21 7.99 3.25 5.08
5 2.94 5.86 2.20 3.77
7 2.22 4.65 1.62 2.95
10 1.61 3.58 1.15 2.27
15 1.03 2.48 0.74 1.58
20 0.73 1.86 0.52 1.20
  1. (b) Rates on test data are obtained from a 5-fold CV procedure on the ESEAra data set, while FP rates on intergenic data are averages of the FP rates obtained on INTAra by setting a threshold that would produce the same FN rate on each of the 5 fold test data.