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Table 2 Confusion matrix values and dependent parameters at each threshold value.

From: TISs-ST: a web server to evaluate polymorphic translation initiation sites and their reflections on the secretory targets

Score threshold Positives tested (259) Negatives tested (5692) Accuracy SN SP MCC
  TP FN TN FP     
≥ 70 79 180 5570 122 0.949 0.305 0.978 0.320
≥ 60 105 154 5456 236 0.934 0.405 0.958 0.319
≥ 50 131 128 5309 383 0.914 0.505 0.932 0.318
≥ 40 157 102 5159 533 0.893 0.606 0.906 0.326
≥ 30 183 76 4801 891 0.837 0.706 0.843 0.291
≥ 20 209 50 4414 1278 0.776 0.806 0.775 0.274
≥ 10 235 24 3600 2092 0.644 0.907 0.632 0.225
  1. Values in parentheses indicate the number of proteins in each set.