Skip to main content

Table 1 The list of herpesviruses to be analyzed.

From: AT excursion: a new approach to predict replication origins in viral genomes by locating AT-rich regions

Virus

Abbrev.

Accession

Length

AT%

Alcelaphine herpesvirus 1

alhv1

NC_002531

130608

53

Ateline herpesvirus 3

athv3

NC_001987

108409

63

Bovine herpesvirus 1

bohv1

NC_001847

135301

28

Bovine herpesvirus 4

bohv4

NC_002665

108873

59

Bovine herpesvirus 5

bohv5

NC_005261

138390

25

Callitrichine herpesvirus 3

calhv3

NC_004367

149696

51

Cercopithecine herpesvirus 1

cehv1

NC_004812

156789

26

Cercopithecine herpesvirus 2

cehv2

NC_006560

150715

24

Cercopithecine herpesvirus 8

cehv8

NC_006150

221454

51

Cercopithecine herpesvirus 9

cehv7

NC_002686

124138

59

Cercopithecine herpesvirus 15

cehv15

NC_006146

171096

38

Cercopithecine herpesvirus 16

cehv16

NC_007653

156487

24

Cercopithecine herpesvirus 17

mmrv

NC_003401

133719

47

Equid herpesvirus 1

ehv1

NC_001491

150224

44

Equid herpesvirus 2

ehv2

NC_001650

184427

43

Equid herpesvirus 4

ehv4

NC_001844

145597

50

Gallid herpesvirus 1

gahv1

NC_006623

148687

52

Gallid herpesvirus 2

gahv2

NC_002229

174077

56

Gallid herpesvirus 3

gahv3

NC_002577

164270

46

Human herpesvirus 1

hsv1

NC_001806

152261

32

Human herpesvirus 2

hsv2

NC_001798

154746

30

Human herpesvirus 3

vzv

NC_001348

124884

54

Human herpesvirus 4

ebv

NC_007605

171823

41

Human herpesvirus 5 (AD169)

hcmv

NC_001347

230287

43

Human herpesvirus 5 (Merlin)

hcmv-m

NC_006273

235645

42

Human herpesvirus 6

hhv6

NC_001664

159321

58

Human herpesvirus 6B

hhv6b

NC_000898

162114

58

Human herpesvirus 7

hhv7

NC_001716

153080

63

Human herpesvirus 8

hhv8

NC_003409

137508

47

Ictalurid herpesvirus 1

ichv1

NC_001493

134226

43

Meleagrid herpesvirus 1

mehv1

NC_002641

159160

52

Murid herpesvirus 1

mcmv

NC_004065

230278

41

Murid herpesvirus 2

rcmv

NC_002512

230138

39

Murid herpesvirus 4

muhv4

NC_001826

119450

53

Macaca fuscata rhadinovirus

mfrv

NC_007016

131217

48

Ostreid herpesvirus 1

oshv1

NC_005881

207439

61

Ovine herpesvirus 2

ohv2

NC_007646

135135

47

Pongine herpesvirus 4

ccmv

NC_003521

241087

38

Psittacid herpesvirus 1

pshv1

NC_005264

163025

39

Saimiriine herpesvirus 2

sahv2

NC_001350

112930

65

Suid herpesvirus 1

shv1

NC_006151

143461

26

Tupaiid herpesvirus 1

thv

NC_002794

195859

34