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Figure 3 | BMC Bioinformatics

Figure 3

From: A new advance in alternative splicing databases: from catalogue to detailed analysis of regulation of expression and function of human alternative splicing variants

Figure 3

Functional protein domain analysis andmulti-alignment of the translated sequences of predicted ORFs. (A) Functional protein domain analysis of the [GenBank:AB055311] transcript. (1) Diagram of the [GenBank:AB055311] ORF aligned with the corresponding transcript and gene graphical representations. (2) Form for selecting ORF exons for analysis. (3) Translated sequences of the selected ORF exons. (4) Form for selecting external websites to predict functional protein domains. (B) Multi-alignment of translated sequences of predicted ORFs. (1) Amino acids encoded by nucleotides from two exons (the amino acid is within the exon that yields two of the three codon nucleotides). (2) Methionines are represented by a green bold "M". (3) Red bold asterisks correspond to stop codons. (4) CDS from CCDS is highlighted in green.

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BMC Bioinformatics

ISSN: 1471-2105

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