Table 1 Summary of probesets, genes and proteins covered by probesets.

All probesets

22690

22283

Non-control probesets

22626

22215

Probesets associated with protein-coding mRNAs (Investigated probesets)

21097

16213

Probesets passing BLAST (Annotated probesets)

18894

(probeset retaining percentage: 83.5% of the non-control, 89.6% of the investigated)

15288

(probeset retaining percentage: 68.8% of the non-control, 94.3% of the investigated)

Genes covered by non-control probesets

13259

12849

Genes covered by investigated probesets

12853

11286

Genes covered by annotated probesets

12626

(Gene retaining percentage: 95.2% of the non-control)

(Gene coverage: 45.1% of all protein-coding genes*)

10976

(Gene retaining percentage: 85.4% of the non-control)

(Gene coverage: 43.2% of all protein-coding genes*)

Proteins covered by annotated probesets

21512

(Protein coverage: 42.0% of all proteins*)

22740

(Protein coverage: 40.8% of all proteins*)