Figure 2
From: Establishing a major cause of discrepancy in the calibration of Affymetrix GeneChips
A histogram of the percent overlaps between two gene lists, produced from: (a) all permutation pairs for the 45 different protocols, excluding those comparisons between identical protocols; (b) all permutation pairs for the 45 different protocols which share a common choice of expression measure; (c) all permutation pairs for the 45 different protocols which share a common choice of background subtraction excluding those comparisons between identical protocols; (d) all permutation pairs for the 45 different protocols which share a common choice of normalization excluding those comparisons between identical protocols.