Figure 1

A schematic representation of the algorithm : (I) Partition strategy of the SNPs into segments thank's to the multiallelic IEM, with a new segment creation at each orphan haplotype (see text). (II) IEM-bootstrap-GS algorithm to obtain reliable haplotypes for each segment. (III) Ligation of the haplotyped segments with the same multiallelic IEM-bootstrap-GS to obtain reliable results on all the genotype dataset.