From: A constrained polynomial regression procedure for estimating the local False Discovery Rate
Case | m | π 0 | Configuration | polfdr | Twilight | LocalFDR | pava.fdr | locfdr |
---|---|---|---|---|---|---|---|---|
1 | 500 | 0.6 | (a) | 0.604 | 0.613 | 0.523 | 0.852 | 0.604 |
2 | (b) | 0.707 | 0.718 | 0.665 | 0.890 | 0.716 | ||
3 | (c) | 0.656 | 0.677 | 0.604 | 0.839 | 0.669 | ||
4 | 0.8 | (a) | 0.787 | 0.806 | 0.721 | 0.849 | 0.791 | |
5 | (b) | 0.841 | 0.860 | 0.792 | 0.915 | 0.849 | ||
6 | (c) | 0.812 | 0.839 | 0.767 | 0.890 | 0.828 | ||
7 | 0.9 | (a) | 0.863 | 0.897 | 0.824 | 0.918 | 0.886 | |
8 | (b) | 0.903 | 0.915 | 0.876 | 0.954 | 0.912 | ||
9 | (c) | 0.888 | 0.907 | 0.842 | 0.934 | 0.899 | ||
10 | 0.98 | (a) | 0.940 | 0.947 | 0.938 | 0.983 | 0.943 | |
11 | (b) | 0.953 | 0.949 | 0.949 | 0.989 | 0.937 | ||
12 | (c) | 0.951 | 0.954 | 0.948 | 0.988 | 0.947 | ||
13 | 5,000 | 0.6 | (a) | 0.614 | 0.613 | 0.469 | 0.851 | 0.616 |
14 | (b) | 0.720 | 0.718 | 0.707 | 0.888 | 0.725 | ||
15 | (c) | 0.670 | 0.676 | 0.604 | 0.838 | 0.680 | ||
16 | 0.8 | (a) | 0.801 | 0.806 | 0.729 | 0.848 | 0.805 | |
17 | (b) | 0.853 | 0.859 | 0.842 | 0.916 | 0.861 | ||
18 | (c) | 0.833 | 0.841 | 0.803 | 0.888 | 0.841 | ||
19 | 0.9 | (a) | 0.877 | 0.903 | 0.857 | 0.918 | 0.900 | |
20 | (b) | 0.920 | 0.929 | 0.914 | 0.954 | 0.929 | ||
21 | (c) | 0.901 | 0.918 | 0.883 | 0.934 | 0.915 | ||
22 | 0.98 | (a) | 0.968 | 0.974 | 0.971 | 0.982 | 0.975 | |
23 | (b) | 0.974 | 0.980 | 0.979 | 0.989 | 0.980 | ||
24 | (c) | 0.972 | 0.978 | 0.975 | 0.986 | 0.978 |