|
SP-86-PDB
|
UCD
|
NCD
|
CD
|
|---|
| |
UPGMA
|
NJ
|
UPGMA
|
NJ
|
UPGMA
|
NJ
|
|
Gzip
|
0.5372
|
0.5265
|
0.5450
|
0.5265
|
0.5372
|
0.5265
|
|
Bzip2
|
0.5411
|
0.5265
|
0.5400
|
0.5265
|
0.5440
|
0.5390
|
|
PPMd16
|
0.5367
|
0.5265
|
0.5468
|
0.5265
|
0.5477
|
0.5392
|
|
PPMd8
|
0.5346
|
0.5265
|
0.5384
|
0.5265
|
0.5477
|
0.5392
|
|
PPMd4
|
0.5346
|
0.5265
|
0.5371
|
0.5402
|
0.5388
|
0.5365
|
|
PPMd2
|
0.5377
|
0.5265
|
0.5528
|
0.5265
|
0.5439
|
0.5375
|
|
Huffman
|
0.5335
|
0.5265
|
0.5415
|
0.5265
|
0.5406
|
0.5265
|
|
Ac fast
|
0.5399
|
0.5265
|
0.5403
|
0.5265
|
0.5413
|
0.5265
|
|
Rc fast
|
0.5399
|
0.5389
|
0.5401
|
0.5299
|
0.5438
|
0.5265
|
|
Ac med.
|
0.5407
|
0.5355
|
0.5355
|
0.5276
|
0.5438
|
0.5265
|
|
Rc med.
|
0.5407
|
0.5265
|
0.5343
|
0.5317
|
0.5407
|
0.5265
|
|
Ac slow
|
0.5407
|
0.5291
|
0.5418
|
0.5265
|
0.5382
|
0.5265
|
|
Rc slow
|
0.5407
|
0.5332
|
0.5461
|
0.5283
|
0.5340
|
0.5265
|
|
BwtRleHuff
|
0.5376
|
0.5317
|
0.5429
|
0.5269
|
0.5487
|
0.5290
|
|
BwtMtfRleHuff
|
0.5374
|
0.5317
|
0.5409
|
0.5359
|
0.5487
|
0.5265
|
|
BwtRleAc fast
|
0.5386
|
0.5366
|
0.5593
|
0.5453
|
0.5481
|
0.5265
|
|
BwtMtfRleAc fast
|
0.5386
|
0.5265
|
0.5486
|
0.5302
|
0.5481
|
0.5265
|
|
BwtRleRc fast
|
0.5386
|
0.5265
|
0.5468
|
0.5265
|
0.5481
|
0.5265
|
|
BwtMtfRleRc fast
|
0.5364
|
0.5356
|
0.5478
|
0.5265
|
0.5481
|
0.5265
|
|
BwtRleRc med.
|
0.5376
|
0.5265
|
0.5439
|
0.5265
|
0.5481
|
0.5265
|
|
BwtMtfRleRc med.
|
0.5351
|
0.5265
|
0.5422
|
0.5265
|
0.5481
|
0.5265
|
|
BwtRleRc slow
|
0.5376
|
0.5265
|
0.5466
|
0.5265
|
0.5540
|
0.5302
|
|
BwtMtfRleRc slow
|
0.5376
|
0.5265
|
0.5426
|
0.5341
|
0.5442
|
0.5291
|
|
BwtWavelet
|
0.5376
|
0.5265
|
0.5376
|
0.5265
|
0.5449
|
0.5351
|
- Experimental results for the SP-86-PDB data set, with the UCD (left), NCD (middle), and CD (right) distance. For each compression algorithm, we report the F-measure for both UPGMA and NJ methods.
