Table 1 Organization of heterogeneous kidney carcinoma dataset
From: Classification of heterogeneous microarray data by maximum entropy kernel
Platform | Array type | #Normal/Carcinoma | Brief comments |
|---|---|---|---|
GPL9 | Spotted, DNA/cDNA | 10/10 | Renal clear cell carcinoma, primary tumor [30] |
GPL10 | Spotted, DNA/cDNA | 10/10 | Renal clear cell carcinoma, primary tumor [30] |
GPL91 | Affymetrix, oligo | 14/0 | Large-scale analysis of the human tran-scriptome (HG-U95A) kidney [31]; Normal human tissue expression profiling (HG-U95A) kidney [32]; Kidney transplant rejection expression profiling kidney normal donor [33] |
GPL96 | Affymetrix, oligo | 10/9 | Large-scale analysis of the human tran-scriptome (HG-U133A) kidney [34]; Renal clear cell carcinoma (HG-U133A) [35] |
GPL97 | Affymetrix, oligo | 8/9 | Renal clear cell carcinoma (HG-U133B) [35] |
GPL92 | Affymetrix, oligo | 2/0 | Normal human tissue expression profiling (HG-U95B) kidney [32] |
GPL93 | Affymetrix, oligo | 2/0 | Normal human tissue expression profiling (HG-U95C) kidney [32] |
GPL94 | Affymetrix, oligo | 2/0 | Normal human tissue expression profiling (HG-U95D) kidney [32] |
GPL95 | Affymetrix, oligo | 2/0 | Normal human tissue expression profiling (HG-U95E) kidney [32] |
GPL 1074 | Affymetrix, oligo | 2/0 | Large-scale analysis of the human tran-scriptome (GNFlb) kidney [34] |